FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005777246

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005777246
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6320510
Sequences flagged as poor quality0
Sequence length35-101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70890.11215867074017762No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATAGTCG1350.006963280513.66781894-95
ACGACGG5600.00373504435.47730650-51
Produced by FastQC (version 0.11.5)