FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005781854

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005781854
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8079195
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGATC13403.0762567E-78.5970153
GCGCGAT13151.9082643E-57.66539962
CTCACGC53750.06.2958143
ACCGCGC20855.157066E-66.21582751
TGCGATC17601.2870855E-46.13636353
GCTCACG55500.06.09729772
GGCGCGA15400.0010805786.07792231
ACCGCAC19005.6155717E-56.0631581
GCGATCT30902.921297E-96.0582534
ACTGCGC22602.951003E-66.05309721
GGTGCGA18702.9444872E-45.77540061
GTGCGAT18100.0073373955.1712712
Produced by FastQC (version 0.11.5)