FastQCFastQC Report
Fri 27 May 2022
EGAF00005783351

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005783351
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119163272
Sequences flagged as poor quality0
Sequence length98
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3261290.2736824816290711No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA1782250.14956370113771297Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GTGGAAAACTGGAAGACAGAAGTACGGGAAGGCGAAGAAAAGAATAGAGA1483510.124493896072273No Hit
GGCGAAGAAAAGAATAGAGAAGATAGGGAAATTAGAAGATAAAAACATAC1410150.11833763678459584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)