EGAF00005784922 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005784922
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13793402
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	34979	0.25359226099551074	No Hit
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	29417	0.2132686338004214	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	19709	0.14288715720748224	No Hit
GCCACTTGATTTCTTTTCCTTTCTCTCTCTACCAATATTAAGCCTTAGTG	18463	0.1338538527333576	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	18450	0.1337596047733547	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGACTTCCGATCAATAGGTTTGATGGC	17584	0.12748124066854574	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	15427	0.11184332915114051	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	15369	0.11142283825266602	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	14864	0.107761667498707	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	14852	0.10767466938178125	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTATA	340	86.65026	70
CGCGTAT	640	73.45122	69
CGATCTA	345	69.868195	70
TCGCGAC	265	66.52186	69
CGCGATA	290	65.18341	65
TAGCGTA	275	64.677986	60
CGCGAAT	395	64.644806	64
CGCGTAC	320	64.03169	49
GTTAGCG	380	63.908237	16
TCGCGTA	335	63.47343	59
GCGTACG	325	61.989708	50
CGCGATC	370	61.883545	12
ACGTACG	275	61.81535	12
GTACGGG	255	61.59396	61
CGATAAG	480	61.440495	32
CGAATCG	245	60.89182	26
GTCGCGT	320	60.714584	24
CCGATCG	335	60.210087	54
CTCGCGT	355	59.865185	58
TCGCGTT	325	59.78073	25