EGAF00005784966 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005784966
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17403489
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	45435	0.26106834095163334	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGACTTCCGATCAATAGGTTTGATGGC	26265	0.1509180141981875	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	25731	0.14784966393807586	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	25048	0.1439251635117533	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	20873	0.1199357209350378	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	19348	0.11117311017348304	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTATA	320	92.79287	70
CGCGTAT	635	69.90475	69
TACGCGA	295	63.561665	20
ATTCGCG	435	63.057995	6
TGCGAAC	910	62.95784	16
GTACGCG	305	62.61489	19
CGTACGG	235	62.057594	30
TAGAACG	760	61.81474	60
CGCGAAA	630	61.72765	14
CGCGATC	925	61.560287	12
ACGTACG	475	61.402245	12
CGGATCG	470	61.317932	17
CGCGAAT	450	61.18728	64
ACTAGCG	245	61.06649	59
CGCGTAC	495	60.36222	49
CGCGATA	305	59.44142	65
GCGTACG	505	59.17357	50
CGACGGT	865	59.00598	8
TACGGTA	570	58.609535	60
GCGCGAA	470	58.557552	63