EGAF00005785038 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005785038
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14980860
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	35578	0.23748970352836887	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	32057	0.21398637995415484	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	23458	0.15658647100366735	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	21884	0.14607973107017888	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGACTTCCGATCAATAGGTTTGATGGC	18674	0.12465238978269606	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	18518	0.12361106104722959	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	18003	0.12017334118334996	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	16704	0.1115022769053312	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	16448	0.10979342974969394	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	15192	0.10140939839234862	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTATA	305	84.930466	70
CGCGTAT	550	72.82131	69
CGCGAAT	300	66.49025	64
CGCGATA	255	63.18269	65
CCGTCTA	425	62.841614	27
CGATCTA	450	62.360977	70
CGCGCAA	340	62.240532	41
ACGTACG	335	62.119827	12
TTCGCGT	355	61.86169	59
TCGCTCG	405	61.851685	55
TCGCGTA	310	61.845848	59
CGTACGG	365	61.768353	30
TCGCGAC	245	60.902973	69
TCGTACG	365	60.81787	29
CGGCTAG	480	60.69929	25
TACGCGA	280	60.698677	20
CGCGTAC	435	60.67233	49
GCGCGAA	330	60.38691	63
TTCGTCG	455	60.219826	11
GGGTACG	495	59.962475	70