EGAF00005785042 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005785042
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19090440
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	47326	0.2479041865981088	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGACTTCCGATCAATAGGTTTGATGGC	27245	0.14271541148344408	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	26828	0.14053107209681914	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	26292	0.13772338406029405	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	23989	0.1256597543063439	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	22660	0.11869815467846735	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	19703	0.10320872646204068	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTATA	385	83.79344	70
TACGCGA	315	67.24431	20
CGCGTAT	540	67.07102	69
ACGTACG	620	63.847477	12
CGTACGG	525	63.497097	30
TCGTACG	520	63.440357	29
CGACGGT	760	62.594692	8
CGCGATA	385	62.48368	65
TGCGAAC	840	61.180492	16
TAGAACG	915	60.856945	60
CTACGCG	345	60.389675	19
GCGTAAC	380	60.31037	14
CGCGATC	785	60.158886	12
TCGCGAC	390	59.914555	69
TCGCGTG	535	59.8474	60
GTCGCGT	450	59.41922	24
GTACGCG	270	59.15952	19
TCGCACG	600	59.031067	14
AGTACGC	705	58.823833	64
TCGCTCG	615	58.798466	55