EGAF00005785060 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005785060
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6763830
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	15167	0.22423685988559738	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	10761	0.15909625167989142	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	10632	0.15718904821676477	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	10537	0.15578451853461722	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	9246	0.13669769938038065	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	8549	0.12639288687030867	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	7913	0.11698993026140515	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	7608	0.11248065075556304	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	6875	0.10164359541857203	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGCGTA	185	136.51653	145
TAACCGA	700	72.28657	9
CTAGGAT	3005	60.932705	145
GAGTACC	4845	60.108074	1
AGTACCC	4950	58.82566	2
ACCCATA	5200	58.26407	5
TTCGTGT	2800	57.197453	3
CGGCGAA	440	53.573368	5
CCCATAA	5430	52.9872	6
TCGTGTT	2990	52.866817	4
GCAATCG	565	51.544006	1
CGTGTTC	3130	50.502544	5
TTTCGTG	3140	50.3417	2
GCTAGCC	2985	49.013466	1
GTACCCG	1945	48.834152	5
CTAGTCG	1090	48.34035	3
GTACCCA	6125	47.54074	3
CATAATA	6415	46.894577	8
ATTCGCG	400	46.797916	6
TACCCAT	6275	46.293472	4