FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77951945
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA313500.09.87186694
AGATCGG376950.08.09806194
ATCGGAA311100.07.63839194
TAGATCG114700.06.79666894
TCGGAAG376250.06.06612294
AGCGTCG142050.05.81865894
GCGTCGT127450.05.674158692-93
CGTCGTG134600.05.477797594
Produced by FastQC (version 0.11.5)