FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787162

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787162
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29658432
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATTAGT592400.013.804823145
GCGTCGG215950.013.6975765145
ATTAGTG593150.013.249562145
AGATTAG746650.013.127934145
TAAGATT1027450.012.510793145
GTTAAGA1235250.011.914558145
GTGTTAA1490900.011.695085145
TGTTAAG1379600.011.661138145
TTAGTGT333000.011.58255145
AGTGTTA1653650.011.302541145
TTAAGAT1272250.011.300224145
GAGTGTT1823050.011.0953865145
AGAGTGT2053950.010.846996145
TTAGTGG372600.010.507216145
AAGATTA917800.010.197999145
AAGAGTG2222500.010.066789145
AAAGAGT2384850.09.764528145
ATCGGAC90750.09.267192145
TAGTGGT298300.08.9925995145
GTAGGGA3268750.08.991638145
Produced by FastQC (version 0.11.5)