FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32712259
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCATCG245250.020.900467145
CGTATGC239250.018.909422145
TATGCCG184850.018.591074145
TCGTATG221900.018.492887145
CTCGTAT253800.018.053902145
CGCGTAT74800.017.931463145
TCGCGTA87050.017.823402145
TCTCGTA312350.016.64268145
ATCGCGT101500.016.35743145
ATCTCGT373800.016.214838145
GCGTATG89200.014.467742145
ATGCCGT213450.013.654491145
CGAGATT1275950.013.6087265145
CATCTCG483550.013.254292145
ACGAGAT1432700.013.0458765145
CACGAGA1560650.012.831097145
GTATGCC287600.012.780996145
AGTCACG1979900.012.44668145
TCACGAG1708000.012.352383145
GTCACGA1786950.012.321909145
Produced by FastQC (version 0.11.5)