FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787175

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787175
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40422173
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA115800.08.92569694
AGATCGG141700.08.12314594
ATCGGAA118500.07.77079994
TAGATCG53050.07.439125594
TCGGAAG150000.06.04496894
Produced by FastQC (version 0.11.5)