FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21539293
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG154200.014.104732145
GATTAGT611000.013.858926145
ATTAGTG597850.013.630193145
TTAGTGT307850.012.410789145
AGATTAG733800.012.004014145
TGTTAAG1320950.011.948131145
TTAAGAT1198550.011.668202145
GTGTTAA1425650.011.431713145
TAAGATT985350.011.323379145
AGTGTTA1572050.011.174162145
GTTAAGA1179450.010.842937145
TTAGTGG349850.010.775797145
GAGTGTT1724150.010.54582145
AGAGTGT1901300.010.074189145
GTTAAGT121300.09.981219145
AAGATTA873950.09.846731145
AAGAGTG2054000.09.829981145
TAGTGTT230000.09.6769495145
TAGTGGT279000.09.068786145
AAAGAGT2192800.09.058984145
Produced by FastQC (version 0.11.5)