FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005787212

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787212
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102711525
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA77450.08.2763646-47
GCCGTAT97350.07.139271746-47
CGTATCA100200.06.961425348-49
AGATCGG308050.06.925668794
GATCGGA259850.06.763569494
ATCGGAA266150.06.144405494
TAGATCG101350.06.027631394
CCGTATC116050.05.76778648-49
GAGCGTC265200.05.34868579
AGAGCGT265150.05.207648
TCGCCGT139500.05.19965944-45
GCGTCGT142200.05.06323910-11
Produced by FastQC (version 0.11.5)