FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787219

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787219
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30285646
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG167650.019.417063145
CGTATGC215700.018.11671145
CTCGTAT238850.017.75707145
TCTCGTA290150.017.69096145
TCGTATG207100.017.64376145
ATCTCGT349250.015.880558145
CGATAGA760400.015.703346145
GCGATAG841150.015.152565145
AGCGATA942850.014.825356145
ATCGCGT71600.014.783612145
CGCGTAT53100.014.063176145
CAGCGAT1108950.013.761978145
ATGCCGT188600.013.300719145
ACAGCGA1252450.013.163483145
CACAGCG1428550.012.672545145
GCGTATG74200.012.6045265145
GATCTCG468650.012.314171145
GATAGAT942900.012.271792145
GTATGCC265550.012.094785145
TCGCGTA60950.011.89507145
Produced by FastQC (version 0.11.5)