FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27341949
Sequences flagged as poor quality0
Sequence length125
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA797100.010.210383118-119
ATCGGAA738800.09.889547118-119
ACACGTC263450.09.850029118-119
AGATCGG880600.09.758675118-119
TCGGAAG705150.09.708092118-119
CGGAAGA678300.09.518301118-119
CGTCTGA206400.09.433071118-119
ACGTCTG247100.09.058237118-119
TAGATCG290350.08.988643118-119
CACGTCT276500.08.976619118-119
GCACACG364350.08.966034118-119
CACACGT327800.08.850388118-119
CAGATCG266550.07.9177375118-119
AGAGCAC595850.07.837196118-119
AAGATCG285050.07.6645694118-119
AGCACAC524550.07.242114118-119
GAAGAGC802050.07.1268773118-119
GAGCACA595750.07.115033118-119
AAGAGCA777000.06.629778118-119
GAGATCG316200.06.6274843118-119
Produced by FastQC (version 0.11.5)