FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787269

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787269
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28955839
Sequences flagged as poor quality0
Sequence length125
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC364250.011.220874118-119
CGTCTGA271050.010.780221118-119
ACGTCTG321100.010.192262118-119
CACACGT441600.010.022803118-119
CACGTCT363550.09.999674118-119
ATCGGAA1009450.09.720402118-119
GATCGGA1089950.09.569745118-119
TCGGAAG960100.09.473894118-119
GCACACG495950.09.325997118-119
AGATCGG1204300.09.325043118-119
CGGAAGA918400.09.221129118-119
TAGATCG384750.09.039216118-119
AGAGCAC770700.08.068631118-119
CAGATCG357750.07.8851533118-119
AGCACAC666950.07.8218126118-119
AAGATCG371800.07.7390833118-119
GAGCACA758800.07.6310654118-119
GAAGAGC1010950.07.4154744118-119
AAGAGCA970800.07.094468118-119
GAGATCG419700.07.054137118-119
Produced by FastQC (version 0.11.5)