FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51248657
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG43900.013.2683193
CGTATGC46250.012.9141881
GATCGGA136800.08.41305294
AGATCGG164450.08.08399794
ATCGGAA142850.07.990972594
TAGATCG61850.06.98749894
ATGCCGT91900.06.7982154
GCCGTCT122250.05.45636
CCGTCTT140650.05.34366237
TGCCGTC125800.05.07828435
Produced by FastQC (version 0.11.5)