FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51248657
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA139350.08.220494
ATCGGAA144350.07.77304594
AGATCGG172850.07.71363494
TAGATCG59500.06.864554494
GCGTCGT61750.05.397982694
Produced by FastQC (version 0.11.5)