FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787288

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787288
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27762825
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATTAGT500650.014.68391145
GCGTCGG180500.014.218836145
AGATTAG630300.013.618911145
ATTAGTG497500.013.581908145
TTAAGAT1048950.012.282043145
GTTAAGA1029150.012.222464145
TGTTAAG1148000.012.037021145
GTGTTAA1241800.011.851747145
TAAGATT855250.011.732242145
AGTGTTA1376600.011.381119145
GAGTGTT1530000.011.192483145
TTAGTGT273750.011.149771145
AAGATTA766350.010.586219145
AGAGTGT1720550.010.222603145
AAGAGTG1878500.010.185121145
TTAGTGG327750.010.042714145
AAAGAGT2005900.09.82377145
TAGGGAA2589100.09.181858145
ATCGGAC77000.09.133117145
GTAGGGA2767150.08.921183145
Produced by FastQC (version 0.11.5)