FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31928412
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG178650.014.406465145
ACGTCCG48400.013.3314295145
GTACGTC1632800.012.867598145
TACGTCC1492400.012.839379145
GGTGTAG751100.012.82801145
ACGTCCT1410150.012.631994145
CGTCCTG1360000.012.44744145
TGGTGTA876700.012.032173145
TGTACGT1806600.011.9868555145
GTGTACG1978050.011.706571145
TGTACGG62300.011.520708145
GTGTAGT283550.011.326772145
CTGGTGT1141750.011.131225145
AGTGTAC2205400.011.032315145
GAGTGTA2423100.010.702362145
ATCGGAC79750.010.363495145
GATCTCG332350.010.056279145
AGAGTGT2766200.09.676319145
TCGGTGG242050.09.464858145
GTCCTGG1660450.09.435415145
Produced by FastQC (version 0.11.5)