FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787299

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787299
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38130753
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGATCG205050.031.397646145
TATGCCG235600.018.771477145
CGTATGC301800.018.401508145
TCGTATG284650.017.854626145
CTCGTAT335550.017.695814145
TCTCGTA414200.016.401115145
CGCGTAT87400.016.341753145
ATCGCGT122600.015.848501145
CTCGATC1015400.015.579786145
TACTCGA1196100.015.493063145
ATCTCGT503000.015.465915145
ACTCGAT1074950.015.370924145
TTACTCG1324650.015.314064145
TCGCGTA106000.014.978976145
CGATCGC175900.014.755743145
GATCTCG653000.014.733354145
CGATCTC728800.013.966985145
ATTACTC1598500.013.579477145
GTATGCC361600.013.092683145
CATTACT1842950.012.950608145
Produced by FastQC (version 0.11.5)