FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38130753
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG333850.014.549596145
ATTAGTG973150.014.221769145
AGATTAG1217650.013.914375145
GATTAGT988900.013.577384145
TAAGATT1660100.012.874214145
TGTTAAG2295350.012.109625145
AGTGTTA2745700.011.94794145
TTAGTGT509800.011.902908145
GTTAAGA2043800.011.805175145
TTAAGAT2064250.011.793587145
TTAGTGG579000.011.694881145
GTGTTAA2472150.011.519248145
GTTAAGT211150.011.433538145
GAGTGTT3024850.011.099373145
AAGATTA1453500.010.683951145
AGAGTGT3361400.010.481985145
TAGTGGT456300.010.073173145
AAGAGTG3634200.010.040275145
AAAGAGT3881700.09.758697145
ATCGGAC132850.09.44087145
Produced by FastQC (version 0.11.5)