FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787305

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787305
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38330699
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGATCG227200.023.039774145
CTCGTAT266650.017.91815145
TCGTATG223650.017.73241145
TATGCCG188850.017.468023145
CGTATGC243400.017.395689145
ATCGCGT102600.016.888844145
CGCGTAT72700.016.853947145
TCGCGTA89900.015.968159145
ATCTCGT396800.015.110652145
TCTCGTA324300.014.777598145
CGGCTAT1100700.014.695351145
CCGGCTA1287400.014.631034145
GTATGCC310800.013.646593145
ACCGGCT1467050.013.585611145
TATGATC844300.013.241492145
GATCTCG512750.012.86723145
TCACCGG1791850.012.737449145
GGCTATG1186800.012.706769145
CTATGAT985350.012.6483755145
CACCGGC1721150.012.62038145
Produced by FastQC (version 0.11.5)