FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44350565
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA115750.08.67974894
AGATCGG143150.08.19903994
ATCGGAA120400.07.01875994
TAGATCG52700.06.681361794
AGCGTCG54850.06.41946794
TCGGAAG160600.05.057255394
Produced by FastQC (version 0.11.5)