FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32290420
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG250750.014.340977145
ATTAGTG673500.013.6495905145
GATTAGT670700.013.490382145
AGATTAG833400.013.205543145
TAAGATT1169000.012.372753145
TGTTAAG1585100.012.170998145
TTAAGAT1448350.011.718333145
AGTGTTA1909350.011.664701145
GTGTTAA1715150.011.539806145
GAGTGTT2102050.011.316214145
GTTAAGA1406800.011.306866145
AGAGTGT2341900.010.5906515145
TTAGTGT378200.010.581701145
ATCGGAC106750.010.459016145
GTTAAGT168050.010.35406145
AAGAGTG2535600.010.330591145
TTAGTGG421000.010.246436145
AAGATTA1029800.010.243494145
AAAGAGT2728350.09.475873145
TAGGGAA3526700.09.127512145
Produced by FastQC (version 0.11.5)