FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31850009
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG69750.06.128427594
GATCGGA56950.05.856208394
AATTCGT36650.05.64773941
GCGTAAT18800.05.37195792-93
ATTCGTG40500.05.10328152
TAGATCG26851.2845703E-85.073475494
Produced by FastQC (version 0.11.5)