FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005787340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62158356
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGATCG35150.013.68541836-37
CGATCGG39500.012.23806638-39
TCGAGTG94850.09.8194531
ATCGGAA327550.09.75794594
AGATCGG400550.09.46767994
AATTCGT79150.09.3305711
GATCGGA358000.09.21639794
AGCGTCG125850.08.76402394
CGAGTGA114200.08.355392
CTAACCG60400.08.288321558-59
TAGATCG125000.08.22286194
GCGTCGT103950.07.9013794
ATTCGTG89300.07.8954442
TAACCGC63350.07.86526158-59
TCGGAAG359400.07.82235694
GTCGTAT45200.07.746629774-75
CGTCGTG111400.07.162301594
ACTCGCC141250.07.044274394
TACGTAG53750.06.94365580-81
GCGTAAT50400.06.89092492-93
Produced by FastQC (version 0.11.5)