FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005787356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67828292
Sequences flagged as poor quality0
Sequence length15-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTC1097280.16177320225017608No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA975800.1438632716860982No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT940830.1387076059647794No Hit
TGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGGCTGGCTAGG796010.11735663342370467No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)