FastQCFastQC Report
Thu 16 May 2024
EGAF00005787372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59123171
Total Bases8.4 Gbp
Sequences flagged as poor quality0
Sequence length15-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTC874430.14789971261859416No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA762350.12894267798998804No Hit
TGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGGCTGGCTAGG691970.11703871566699289No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT608660.10294779351398456No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)