FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005787417

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787417
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87181022
Sequences flagged as poor quality0
Sequence length15-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT1599540.18347341695535527No Hit
GGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAG1398130.16037091191704544No Hit
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG1293640.14838550527659564No Hit
CTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGC1171460.13437098730042416No Hit
GCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGG1038990.119176166574418No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)