FastQCFastQC Report
Thu 16 May 2024
EGAF00005787524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62262977
Total Bases8.7 Gbp
Sequences flagged as poor quality0
Sequence length15-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTC915910.14710347049419112No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA794520.12760713320855185No Hit
TGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGGCTGGCTAGG752280.1208230052989596No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT671470.10784418483555645No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)