FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005787555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61534681
Sequences flagged as poor quality0
Sequence length15-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT1951480.3171349827912491No Hit
CGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAGGGACGCA656350.10666342773435358No Hit
CTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTGAGAGCT617660.10037591646895837No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)