FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005787689

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787689
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92681395
Sequences flagged as poor quality0
Sequence length1-101
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1848470.1994434805388935No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT1668120.17998434313596595No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG970840.10475025758945472No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)