FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005787756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66239339
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCACCACACCTGCAGCGCCGAGCCGACCCGAAACACGACGGCCCCCCGG1556070.23491629347327878No Hit
CCCAGACGCACCTCGGCCAACAGACCACCACACCGTCGGGACAATGACCA1451790.21917338275371379No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCTTG1300320.1963063067401684No Hit
CCCGGGACAGGAGCGGGGAGGACACGCGAGGCCAGAAAAGCGTGGCATCG1242470.18757282587013738No Hit
GGCAGGAGAGACCGGACAGCGGCCAGCCCCCGGCGAGAAGCGGAGGCGGA1208020.18237198894753465No Hit
CACGGGACCGAGAAAGACTGGTGAGGCAGCGGTCCGGGAGGCGCCGACGC1195130.18042601542264786No Hit
CGGGACAGGAGCGGGGAGGACACGCGAGGCCAGAAAAGCGTGGCATCGGG1147120.17317805662281743No Hit
CTCCGTTCTCGCCCTCGCTCTCCCTCCACACAAGCCGGAGGGTGCGCGGC1069650.16148258967378887No Hit
CCCAGCGCAAGACCCAAACACACACAGACAACCACCGCAGGGCGACCGAC904620.13656839178301583No Hit
GGAGAGAGGAAAAAAGACCGGCTGCGGCGAGCGGGGAGGGGGGAACGACA883630.13339957996863466No Hit
CCGGGACAGGAGCGGGGAGGACACGCGAGGCCAGAAAAGCGTGGCATCGG876450.1323156319539964No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCT816700.1232953124728494No Hit
CACCACACCTGCAGCGCCGAGCCGACCCGAAACACGACGGCCCCCCGGGA814920.12302658998454075No Hit
CCCGGGACGGGTCAAAAACCCGTAACGACGTACCGCCCCTCGTAGACACG785140.11853077217452307No Hit
CTCCCTCGCAACGCCACCGGGGATACCACCTCTCTCCGTTCTCGCCCTCG782070.11806730136603566No Hit
CTCCTTCTCTCCTCGACCCCCCTCTCACGGGCTTCTCAGACACAAACGGG780240.11779103049322397No Hit
GCACGGGCGAGGGCGGGAACGGCGGAGCGGGAAGAAGCCGCGAGCGCGGA756960.11427650266860301No Hit
CCGAGAAAGACTGGTGAGGCAGCGGTCCGGGAGGCGCCGACGCGAGGCCA752500.11360318677093079No Hit
CTCGCAACGCCACCGGGGATACCACCTCTCTCCGTTCTCGCCCTCGCTCT739080.11157720037031167No Hit
CAGGAGAGACCGGACAGCGGCCAGCCCCCGGCGAGAAGCGGAGGCGGAGG730800.11032718789660628No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG728930.11004487831619214No Hit
CCTCCTTCTCTCCTCGACCCCCCTCTCACGGGCTTCTCAGACACAAACGG726470.10967349779864198No Hit
CCGAGAAGCACACAGCACGCACCACGCGCGGCGCAGGCCCGCGTCGCGGG725230.1094862978629663No Hit
CTCCCCTGAGCAGTCCCACCACACCTGCAGCGCCGAGCCGACCCGAAACA693100.10463570598130516No Hit
GGCACGGGACCGAGAAAGACTGGTGAGGCAGCGGTCCGGGAGGCGCCGAC684750.1033751257692955No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)