FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005787757

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787757
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66239339
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2959180.4467405690748212No Hit
CGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGG1039810.1569777138023675No Hit
CGGCTGTTGGCCGCGTCCGGCGCGACGTCGGACGTGGGGACCCACTGCCG686130.10358346118157973No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA664590.10033161713766499No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)