FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005787779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95387267
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7214030.7562885725617865No Hit
CGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGG1566900.16426720769764794No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1497520.1569937002178708No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA1429930.1499078488117287No Hit
GTGTGATTCCCGCCGGTTTTGCCTCGCGTGCCCTGACCGGTCCGACGCCC1168640.12251530385077496No Hit
GGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTC1007970.1056713366156093No Hit
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC955120.10013076483258504No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)