FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005787781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99805955
Sequences flagged as poor quality0
Sequence length151
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8552770.8569398489298559No Hit
CGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGG2082760.20868093492016582No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA1752000.1755406278112363No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1562310.15653474785146837No Hit
GGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTC1263130.12655858059772085No Hit
GTGTGATTCCCGCCGGTTTTGCCTCGCGTGCCCTGACCGGTCCGACGCCC1118570.11207447491484851No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)