FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005787799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64473532
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4406350.6834354910166858No Hit
GTTTGCTCGCAGGGCCAACCCCCCAACCCGGGTCGGGCCCTCCGTCTCCC820650.1272847902919294No Hit
CGGCTGTTGGCCGCGTCCGGCGCGACGTCGGACGTGGGGACCCACTGCCG706480.1095767484864952No Hit
CGGTTGTCGGTGTGGCGCGCGCGCCCCGCGTCGCGTGAGCCTGGTCTCCC690070.10703151798787758No Hit
CGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGG680870.10560457584361906No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)