EGAF00005787842 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787842
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	112640106
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	196955	0.17485335107905528	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	194517	0.17268893550224465	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	145070	0.12879071686953136	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	144823	0.12857143440543284	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	143005	0.12695744444700718	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	131691	0.1169130646947367	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	128834	0.1143766679338885	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	125862	0.11173817609866242	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	123619	0.10974687825666642	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	122027	0.10833352731397464	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCGCGT	10560	49.95892	6
ACCGCGT	38160	48.599827	6
ACCGCTA	28180	47.84133	2
CCGCGTT	43290	42.89808	7
AGACCGC	44415	41.180794	4
CAGACCG	46045	40.53366	3
TCGACCG	66140	39.428707	145
CCGCTAA	38650	37.34354	3
CTCGCTA	73630	36.957954	1
GCGTTCT	67565	35.091206	9
TCGCTAT	80415	33.917107	2
CGCTAAG	44150	32.804188	4
CGCTATG	87675	31.35633	3
CTTCGAC	90445	27.059818	145
CACCGCT	51230	27.043022	1
GTCGCGT	8485	26.793583	1
GTCTCGC	69860	25.58492	4
AGAGTCG	57865	25.244293	9
CGATCCT	160835	22.97323	145
CGCGTTC	108085	21.843761	8