EGAF00005787848 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787848
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	129710534
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	315594	0.24330637633486266	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	260092	0.20051725328646014	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	190506	0.14687010694135297	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAGAAGAACGA	170906	0.13175953774116755	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	168650	0.1300202803883299	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	166408	0.12829181629920666	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	156513	0.12066329169533757	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	152453	0.1175332452181563	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	149854	0.1155295529043154	No Hit
CCCGGGTGCCCGGGCCCCCCTCGCGGGGGACCGTGCCCCCGCCGCCGGGG	137501	0.10600603957115773	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	130581	0.10067108350660249	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	41865	63.097565	6
TCGACCG	57370	57.5085	145
CCGCGTT	47230	55.821808	7
AGACCGC	49270	53.591236	4
CAGACCG	52930	50.3088	3
CTCGCTA	73560	44.355946	1
GCGTTCT	65060	40.680836	9
TCGCTAT	82435	39.541004	2
GTGCTCT	121470	37.311817	145
CGCTATG	91120	35.70123	3
CGCGTTC	83490	31.539904	8
CGATCCT	197545	29.814152	145
GACCGCG	97770	27.26032	5
ACCGCTA	18555	23.958178	2
TCAGACC	125050	23.447191	2
GCTATGT	147180	22.385073	4
CTCAGAC	156330	22.114521	1
CTTCGAC	81380	20.84926	145
AGTCGCC	65405	20.208683	7
CCGCTAA	23505	20.105705	3