EGAF00005787858 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787858
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	118476882
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	247374	0.208795163937552	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	209377	0.17672392830189437	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	173654	0.1465720544536275	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	165863	0.13999608801318725	No Hit
GTCCAGAGTCGCCGCCGCCGCCGGCCCCCCGGGTGCCCGGGCCCCCCTCG	151054	0.12749660309257632	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	149680	0.12633688317354605	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	146441	0.12360301649396883	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	145044	0.12242388350496936	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	144113	0.12163807619447649	No Hit
GGCCCGGCTCGCGTCCAGAGTCGCCGCCGCCGCCGGCCCCCCGGGTGCCC	130711	0.11032616472806905	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	120737	0.10190764473359452	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGACCG	84425	53.505287	145
ACCGCGT	31630	48.433212	6
CCGCGTT	34240	44.685078	7
CTCGCTA	67280	42.429985	1
AGACCGC	36550	41.510002	4
TCGCTAT	72235	39.642826	2
CAGACCG	40310	38.32555	3
CGCTATG	78250	36.447662	3
ACCGCTA	16710	33.56581	2
GCGTTCT	48405	31.581997	9
CTTCGAC	109205	28.926607	145
CGATCCT	154715	28.595959	145
TCGCGTC	88440	26.614244	9
CTCGCGT	88955	26.460163	8
CGCGTTC	58105	26.121878	8
CCGCTAA	24265	25.318869	3
GCTATGT	127965	22.653002	4
GACCGCG	71745	21.442095	5
CGGCGCT	128800	21.33148	145
CGCTAAG	27720	21.141983	4