EGAF00005787868 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787868
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	115921853
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	208817	0.18013600938556426	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	151644	0.13081571427261432	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	146960	0.12677506112674028	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	146635	0.12649469983886472	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	134012	0.11560546741777843	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	131595	0.11352044208610089	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	120311	0.10378629817106184	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	42825	53.753933	6
CCGCGTT	45765	50.287334	7
AGACCGC	45635	50.174046	4
CAGACCG	50990	45.398163	3
TCGACCG	59500	44.873863	145
CTCGCTA	65710	41.25347	1
GTGCTCT	115805	40.6859	145
TCGCTAT	71010	38.115715	2
GCGTTCT	61635	37.259727	9
CGCTATG	77270	34.998516	3
CGCGTTC	69950	32.74314	8
ACCGCTA	23260	31.809498	2
CGATCCT	150025	28.698015	145
GACCGCG	82915	27.874262	5
CCGCTAA	29505	26.899292	3
CGCTAAG	33470	23.437708	4
CTTCGAC	81200	22.69411	145
GCTATGT	128425	21.333794	4
TCAGACC	117200	21.019096	2
CGTATCG	11885	20.765257	3