EGAF00005787874 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787874
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	116985984
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	281773	0.24086047778168024	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	256952	0.21964340617077685	No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	256528	0.21928096959034	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	205686	0.17582106246163642	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	201217	0.1720009467117018	No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG	165300	0.1412989781750265	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	135911	0.1161771652918695	No Hit
GCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT	132006	0.11283915857817635	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	129836	0.11098423551320473	No Hit
GCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT	129810	0.1109620106285553	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	123991	0.10598791048336184	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGCTAT	88615	37.40269	2
CTCGCTA	89130	37.119514	1
ACCGCGT	36605	35.686527	6
CGCTATG	93650	35.405437	3
TCGACCG	45045	32.199734	145
AGACCGC	40805	31.870588	4
CCGCGTT	41600	31.369415	7
CAGACCG	45285	29.176073	3
GTCTCGC	84920	29.027557	4
CCGCTAA	30825	27.868015	3
CGCTAAG	33055	25.184153	4
CTTCGAC	74205	24.012774	145
GCGTTCT	54965	23.859581	9
GTCGCGT	5945	23.765625	1
CGATCCT	208030	23.602173	145
TCTCGCT	106845	23.16793	5
GGGGTCT	156820	23.074276	1
GCTATGT	146285	22.886652	4
GGTCTCG	114560	22.738571	3
CGGTGCT	65465	21.868855	145