EGAF00005787882 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787882
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	109829113
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	198714	0.18093016921660834	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	184425	0.16791995761633804	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	166305	0.1514215998448426	No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	151038	0.1375209139675015	No Hit
CACCGCTAAGAGTCGTACGAGGTCGATTTGGCGAGGGCGCTCCCGACGAC	124980	0.11379496436432116	No Hit
CCACACACGACCGGTCGGAGGCAGAACGGCAGCCCCTCGGCGGCCGGCCG	122072	0.11114721467339903	No Hit
CTGGAGGCGACAGCGAGGGCTGTCTGCCGCGTCAGAGGACCCCGCCGGCC	117082	0.10660379274846735	No Hit
CTCCGTCTTCGCGGGCGGCGGCGGCGCCGCCCTCCCCGTCTCTCTCAGCC	116285	0.10587811994803235	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	113732	0.1035535996726114	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	110308	0.1004360291974679	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCTA	33940	48.615932	2
TCGACCG	89895	45.19382	145
CTCGCTA	48140	40.76055	1
CCGCTAA	45695	38.168953	3
ACCGCGT	28145	37.828796	6
TCGCTAT	52635	37.232147	2
AGACCGC	28085	37.005295	4
CGCTATG	57135	34.298927	3
CGCTAAG	52835	33.069508	4
CAGACCG	34545	31.053389	3
CCGCGTT	34715	30.687336	7
CACCGCT	56680	29.930447	1
CTTCGAC	113695	28.029497	145
AGAGTCG	70250	25.030352	9
GTCGCGT	11775	24.109497	1
CGATCCT	115530	23.590494	145
GCGTTCT	45770	22.9776	9
GCTATGT	94550	20.870388	4
GTCTGGA	126515	20.41768	1
TCGTACG	51425	20.207352	10-14