EGAF00005787888 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787888
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	145258826
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	245737	0.16917182023762192	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	196013	0.13494050957013792	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	184224	0.12682465160499093	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	174236	0.11994864945418188	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	155327	0.10693119604312375	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	153539	0.10570028977103257	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	152389	0.10490859949535872	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	151402	0.10422912271093256	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGACCG	88145	45.402344	145
ACCGCGT	36675	44.508793	6
CTCGCTA	73605	41.62351	1
CCGCGTT	39935	40.859806	7
TCGCTAT	81590	37.77345	2
AGACCGC	43520	37.092785	4
CAGACCG	47005	35.1289	3
CGCTATG	87480	35.08516	3
ACCGCTA	18980	27.599672	2
GCGTTCT	59505	27.296133	9
CTTCGAC	115755	26.416456	145
CGATCCT	156965	25.715971	145
GTGCTCT	130520	24.330387	145
CGCGTTC	69255	23.363241	8
CCGCTAA	27225	21.644846	3
CCGGTAA	17170	20.647902	1
CGCTAGA	29045	20.234615	1
GCTATGT	154710	20.203453	4
CGTATCG	11370	20.018108	3
CCCGTAT	22500	19.04279	1