EGAF00005787890 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787890
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	114739614
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	204837	0.1785233476556754	No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	188523	0.16430506729785582	No Hit
CTCCGTCTTCGCGGGCGGCGGCGGCGCCGCCCTCCCCGTCTCTCTCAGCC	159509	0.13901824700229515	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	152508	0.13291660541929312	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	147231	0.128317496344375	No Hit
CACCGCTAAGAGTCGTACGAGGTCGATTTGGCGAGGGCGCTCCCGACGAC	143366	0.12494899974127506	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	128301	0.11181927106709631	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	126346	0.1101154131475464	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	117950	0.10279797524854842	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	46935	54.33635	6
ACCGCTA	39240	50.91771	2
AGACCGC	50315	50.35154	4
CCGCGTT	51380	49.635593	7
TCGACCG	88415	47.46276	145
CAGACCG	55670	46.23761	3
CTCGCTA	54765	42.409706	1
CCGCTAA	51120	41.56571	3
GTGCTCT	112560	41.030052	145
TCGCTAT	58950	39.160664	2
GCGTTCT	67770	37.75103	9
CGCTATG	64195	36.009735	3
CGCTAAG	60585	35.2989	4
CACCGCT	63190	32.3581	1
CGCGTTC	87865	28.996374	8
CGATCCT	130555	26.10157	145
GACCGCG	99390	25.772738	5
CTTCGAC	113340	25.203197	145
TCAGACC	112835	24.180138	2
GTCGCGT	9875	23.317759	1