EGAF00005787892 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787892
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	128730280
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	220408	0.17121690405707188	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	196854	0.15291973263788441	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	171197	0.13298891294262702	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	169701	0.13182679319892723	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	167894	0.1304230830539637	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	153660	0.11936585549258497	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	145516	0.11303944961511775	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	141101	0.10960979809878453	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	137020	0.10643960379795649	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGACCGC	48730	46.498055	4
ACCGCGT	51715	44.42096	6
TCGACCG	94000	42.115543	145
CAGACCG	55960	41.02936	3
CCGCGTT	57700	39.791573	7
CTCGCTA	79020	35.74351	1
TCGCTAT	85045	33.209522	2
GCGTTCT	68630	33.197956	9
CGCTATG	91540	30.77773	3
ACCGCTA	28015	29.867485	2
CTTCGAC	121960	26.998251	145
CCGCTAA	34800	25.325819	3
CGATCCT	175230	23.678541	145
CGCTAAG	38695	22.776546	4
GTCGCGT	10915	22.225832	1
GCTATGT	132490	21.473572	4
GTCTCGC	78730	21.01651	4
CTATGTT	145280	19.699852	5
CGTATCG	14110	19.499891	3
TCAGACC	128755	19.14964	2