EGAF00005787894 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787894
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	101295048
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	161086	0.15902653010243897	No Hit
GGCCCGGCTCGCGTCCAGAGTCGCCGCCGCCGCCGGCCCCCCGGGTGCCC	152997	0.15104094723366931	No Hit
GTCCAGAGTCGCCGCCGCCGCCGGCCCCCCGGGTGCCCGGGCCCCCCTCG	151792	0.1498513530493613	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	128895	0.12724708911732782	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	110039	0.10863216136686168	No Hit
CCCCGCCGGGCCTTCCCAGCCGTCCCGGAGCCGGTCGCGGCGCACCGCCG	109781	0.10837745987345797	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	103809	0.10248181135172571	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGACCG	40135	50.33099	145
ACCGCGT	24030	43.774483	6
CTCGCTA	43890	43.109993	1
TCGCTAT	46320	40.364	2
CCGCGTT	27700	38.092545	7
CGCTATG	49455	38.027275	3
AGACCGC	28485	36.35565	4
CAGACCG	31920	33.138405	3
CGGCGCT	106980	29.939857	145
ACCGCTA	13930	29.075932	2
TTCGGCG	43730	26.143538	7
CGATCCT	107825	26.123217	145
GCGTTCT	40375	25.745262	9
GTCGGCT	23035	25.704288	1
TCGCGTC	121280	23.883064	9
CTCGCGT	121950	23.74076	8
GGATTCG	49760	23.473827	4
CTTCGAC	60250	23.2547	145
CGGGATT	48525	22.792109	2
TCGGCGA	50050	22.736803	8