EGAF00005787906 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787906
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	137681534
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	286366	0.20799158149995625	No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	254987	0.18520058034797898	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	230878	0.16768988061972057	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	192379	0.1397275251160406	No Hit
CCCGGGTGCCCGGGCCCCCCTCGCGGGGGACCGTGCCCCCGCCGCCGGGG	180548	0.13113450638921556	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	166790	0.12114188094388895	No Hit
CCCCCGGGTGCCCGGGCCCCCCTCGCGGGGGACCGTGCCCCCGCCGCCGG	159487	0.11583761116432652	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	151399	0.10996318504121257	No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	148579	0.10791498008730785	No Hit
CTGGAGGCGACAGCGAGGGCTGTCTGCCGCGTCAGAGGACCCCGCCGGCC	143775	0.10442576852753543	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	49990	53.7652	6
AGACCGC	51375	51.766663	4
ACCGCTA	33895	50.018482	2
CCGCGTT	55445	48.49932	7
CAGACCG	57535	47.002834	3
TCGACCG	124595	45.96402	145
CTCGCTA	87760	40.432064	1
GTGCTCT	121195	40.009785	145
CCGCTAA	48665	37.903076	3
TCGCTAT	97490	36.68936	2
GCGTTCT	73475	36.35258	9
CGCTATG	106760	33.66358	3
CGCTAAG	58900	31.147654	4
CACCGCT	64115	27.53216	1
CGATCCT	186230	25.733147	145
GTCGCGT	13265	25.161827	1
CTTCGAC	153350	24.722553	145
TCAGACC	126850	22.90828	2
GTCTCGC	82430	22.799814	4
GAGTCTT	174905	22.735287	4